UPENN - Hierarchical Parcellation of MRI Using Multi-atlas Labeling Methods

data(upenn_roi_mars)

Format

A data frame with 840 rows and 269 variables

See also

https://adni.bitbucket.io/reference/docs/UPENN_ROI_MARS/Multi-atlas_ROI_ADNI_Methods_mod_April2016.pdf

A dataset with variables as follows:

  • RID -4 -4 Participant roster ID

  • VISCODE -4 -4 Visit code

  • EXAMDATE -4 -4 Examination Date

  • VERSION -4 -4 -4

  • IMAGE_UID -4 -4 -4

  • RUNDATE -4 -4 -4

  • STATUS -4 -4 -4

  • CBICA_ID -4 -4 -4

  • DATE -4 -4 -4

  • R702 -4 -4 ICV

  • R701 -4 -4 TOTALBRAIN

  • R601 -4 -4 GM

  • R604 -4 -4 WM

  • R606 -4 -4 GM_L

  • R607 -4 -4 WM_L

  • R613 -4 -4 GM_R

  • R614 -4 -4 WM_R

  • R501 -4 -4 CORPUS_CALLOSUM

  • R502 -4 -4 CEREBELLUM

  • R503 -4 -4 DEEP_WM_GM

  • R504 -4 -4 FRONTAL

  • R505 -4 -4 LIMBIC

  • R506 -4 -4 OCCIPITAL

  • R507 -4 -4 PARIETAL

  • R508 -4 -4 TEMPORAL

  • R509 -4 -4 VENTRICLE

  • R510 -4 -4 CEREBELLUM_L

  • R511 -4 -4 DEEP_WM_GM_L

  • R512 -4 -4 FRONTAL_L

  • R513 -4 -4 LIMBIC_L

  • R514 -4 -4 OCCIPITAL_L

  • R515 -4 -4 PARIETAL_L

  • R516 -4 -4 TEMPORAL_L

  • R517 -4 -4 VENTRICLE_L

  • R518 -4 -4 CEREBELLUM_R

  • R519 -4 -4 DEEP_WM_GM_R

  • R520 -4 -4 FRONTAL_R

  • R521 -4 -4 LIMBIC_R

  • R522 -4 -4 OCCIPITAL_R

  • R523 -4 -4 PARIETAL_R

  • R524 -4 -4 TEMPORAL_R

  • R525 -4 -4 VENTRICLE_R

  • R401 -4 -4 BASAL_GANGLIA

  • R402 -4 -4 DEEP_GM

  • R403 -4 -4 DEEP_WM

  • R404 -4 -4 FRONTAL_GM

  • R405 -4 -4 FRONTAL_WM

  • R406 -4 -4 LIMBIC_GM

  • R407 -4 -4 OCCIPITAL_GM

  • R408 -4 -4 OCCIPITAL_WM

  • R409 -4 -4 PARIETAL_GM

  • R410 -4 -4 PARIETAL_WM

  • R411 -4 -4 TEMPORAL_GM

  • R412 -4 -4 TEMPORAL_WM

  • R413 -4 -4 BASAL_GANGLIA_L

  • R414 -4 -4 DEEP_GM_L

  • R415 -4 -4 DEEP_WM_L

  • R416 -4 -4 FRONTAL_GM_L

  • R417 -4 -4 FRONTAL_WM_L

  • R418 -4 -4 LIMBIC_GM_L

  • R419 -4 -4 OCCIPITAL_GM_L

  • R420 -4 -4 OCCIPITAL_WM_L

  • R421 -4 -4 PARIETAL_GM_L

  • R422 -4 -4 PARIETAL_WM_L

  • R423 -4 -4 TEMPORAL_GM_L

  • R424 -4 -4 TEMPORAL_WM_L

  • R425 -4 -4 BASAL_GANGLIA_R

  • R426 -4 -4 DEEP_GM_R

  • R427 -4 -4 DEEP_WM_R

  • R428 -4 -4 FRONTAL_GM_R

  • R429 -4 -4 FRONTAL_WM_R

  • R430 -4 -4 LIMBIC_GM_R

  • R431 -4 -4 OCCIPITAL_GM_R

  • R432 -4 -4 OCCIPITAL_WM_R

  • R433 -4 -4 PARIETAL_GM_R

  • R434 -4 -4 PARIETAL_WM_R

  • R435 -4 -4 TEMPORAL_GM_R

  • R436 -4 -4 TEMPORAL_WM_R

  • R301 -4 -4 FRONTAL_INFERIOR_GM

  • R302 -4 -4 FRONTAL_INSULAR_GM

  • R303 -4 -4 FRONTAL_LATERAL_GM

  • R304 -4 -4 FRONTAL_MEDIAL_GM

  • R305 -4 -4 FRONTAL_OPERCULAR_GM

  • R306 -4 -4 LIMBIC_CINGULATE_GM

  • R307 -4 -4 LIMBIC_MEDIALTEMPORAL_GM

  • R308 -4 -4 OCCIPITAL_INFERIOR_GM

  • R309 -4 -4 OCCIPITAL_LATERAL_GM

  • R310 -4 -4 OCCIPITAL_MEDIAL_GM

  • R311 -4 -4 PARIETAL_LATERAL_GM

  • R312 -4 -4 PARIETAL_MEDIAL_GM

  • R313 -4 -4 TEMPORAL_INFERIOR_GM

  • R314 -4 -4 TEMPORAL_LATERAL_GM

  • R315 -4 -4 TEMPORAL_SUPRATEMPORAL_GM

  • R316 -4 -4 FRONTAL_INFERIOR_GM_L

  • R317 -4 -4 FRONTAL_INSULAR_GM_L

  • R318 -4 -4 FRONTAL_LATERAL_GM_L

  • R319 -4 -4 FRONTAL_MEDIAL_GM_L

  • R320 -4 -4 FRONTAL_OPERCULAR_GM_L

  • R321 -4 -4 LIMBIC_CINGULATE_GM_L

  • R322 -4 -4 LIMBIC_MEDIALTEMPORAL_GM_L

  • R323 -4 -4 OCCIPITAL_INFERIOR_GM_L

  • R324 -4 -4 OCCIPITAL_LATERAL_GM_L

  • R325 -4 -4 OCCIPITAL_MEDIAL_GM_L

  • R326 -4 -4 PARIETAL_LATERAL_GM_L

  • R327 -4 -4 PARIETAL_MEDIAL_GM_L

  • R328 -4 -4 TEMPORAL_INFERIOR_GM_L

  • R329 -4 -4 TEMPORAL_LATERAL_GM_L

  • R330 -4 -4 TEMPORAL_SUPRATEMPORAL_GM_L

  • R331 -4 -4 FRONTAL_INFERIOR_GM_R

  • R332 -4 -4 FRONTAL_INSULAR_GM_R

  • R333 -4 -4 FRONTAL_LATERAL_GM_R

  • R334 -4 -4 FRONTAL_MEDIAL_GM_R

  • R335 -4 -4 FRONTAL_OPERCULAR_GM_R

  • R336 -4 -4 LIMBIC_CINGULATE_GM_R

  • R337 -4 -4 LIMBIC_MEDIALTEMPORAL_GM_R

  • R338 -4 -4 OCCIPITAL_INFERIOR_GM_R

  • R339 -4 -4 OCCIPITAL_LATERAL_GM_R

  • R340 -4 -4 OCCIPITAL_MEDIAL_GM_R

  • R341 -4 -4 PARIETAL_LATERAL_GM_R

  • R342 -4 -4 PARIETAL_MEDIAL_GM_R

  • R343 -4 -4 TEMPORAL_INFERIOR_GM_R

  • R344 -4 -4 TEMPORAL_LATERAL_GM_R

  • R345 -4 -4 TEMPORAL_SUPRATEMPORAL_GM_R

  • R4 -4 -4 3rd Ventricle

  • R11 -4 -4 4th Ventricle

  • R23 -4 -4 Right Accumbens Area

  • R30 -4 -4 Left Accumbens Area

  • R31 -4 -4 Right Amygdala

  • R32 -4 -4 Left Amygdala

  • R35 -4 -4 Brain Stem

  • R36 -4 -4 Right Caudate

  • R37 -4 -4 Left Caudate

  • R38 -4 -4 Right Cerebellum Exterior

  • R39 -4 -4 Left Cerebellum Exterior

  • R40 -4 -4 Right Cerebellum White Matter

  • R41 -4 -4 Left Cerebellum White Matter

  • R47 -4 -4 Right Hippocampus

  • R48 -4 -4 Left Hippocampus

  • R49 -4 -4 Right Inf Lat Vent

  • R50 -4 -4 Left Inf Lat Vent

  • R51 -4 -4 Right Lateral Ventricle

  • R52 -4 -4 Left Lateral Ventricle

  • R55 -4 -4 Right Pallidum

  • R56 -4 -4 Left Pallidum

  • R57 -4 -4 Right Putamen

  • R58 -4 -4 Left Putamen

  • R59 -4 -4 Right Thalamus Proper

  • R60 -4 -4 Left Thalamus Proper

  • R61 -4 -4 Right Ventral DC

  • R62 -4 -4 Left Ventral DC

  • R71 -4 -4 Cerebellar Vermal Lobules I-V

  • R72 -4 -4 Cerebellar Vermal Lobules VI-VII

  • R73 -4 -4 Cerebellar Vermal Lobules VIII-X

  • R75 -4 -4 Left Basal Forebrain

  • R76 -4 -4 Right Basal Forebrain

  • R81 -4 -4 frontal lobe WM right

  • R82 -4 -4 frontal lobe WM left

  • R83 -4 -4 occipital lobe WM right

  • R84 -4 -4 occipital lobe WM left

  • R85 -4 -4 parietal lobe WM right

  • R86 -4 -4 parietal lobe WM left

  • R87 -4 -4 temporal lobe WM right

  • R88 -4 -4 temporal lobe WM left

  • R89 -4 -4 fornix right

  • R90 -4 -4 fornix left

  • R91 -4 -4 anterior limb of internal capsule right

  • R92 -4 -4 anterior limb of internal capsule left

  • R93 -4 -4 posterior limb of internal capsule inc. cerebral peduncle right

  • R94 -4 -4 posterior limb of internal capsule inc. cerebral peduncle left

  • R95 -4 -4 corpus callosum

  • R100 -4 -4 Right ACgG anterior cingulate gyrus

  • R101 -4 -4 Left ACgG anterior cingulate gyrus

  • R102 -4 -4 Right AIns anterior insula

  • R103 -4 -4 Left AIns anterior insula

  • R104 -4 -4 Right AOrG anterior orbital gyrus

  • R105 -4 -4 Left AOrG anterior orbital gyrus

  • R106 -4 -4 Right AnG angular gyrus

  • R107 -4 -4 Left AnG angular gyrus

  • R108 -4 -4 Right Calc calcarine cortex

  • R109 -4 -4 Left Calc calcarine cortex

  • R112 -4 -4 Right CO central operculum

  • R113 -4 -4 Left CO central operculum

  • R114 -4 -4 Right Cun cuneus

  • R115 -4 -4 Left Cun cuneus

  • R116 -4 -4 Right Ent entorhinal area

  • R117 -4 -4 Left Ent entorhinal area

  • R118 -4 -4 Right FO frontal operculum

  • R119 -4 -4 Left FO frontal operculum

  • R120 -4 -4 Right FRP frontal pole

  • R121 -4 -4 Left FRP frontal pole

  • R122 -4 -4 Right FuG fusiform gyrus

  • R123 -4 -4 Left FuG fusiform gyrus

  • R124 -4 -4 Right GRe gyrus rectus

  • R125 -4 -4 Left GRe gyrus rectus

  • R128 -4 -4 Right IOG inferior occipital gyrus

  • R129 -4 -4 Left IOG inferior occipital gyrus

  • R132 -4 -4 Right ITG inferior temporal gyrus

  • R133 -4 -4 Left ITG inferior temporal gyrus

  • R134 -4 -4 Right LiG lingual gyrus

  • R135 -4 -4 Left LiG lingual gyrus

  • R136 -4 -4 Right LOrG lateral orbital gyrus

  • R137 -4 -4 Left LOrG lateral orbital gyrus

  • R138 -4 -4 Right MCgG middle cingulate gyrus

  • R139 -4 -4 Left MCgG middle cingulate gyrus

  • R140 -4 -4 Right MFC medial frontal cortex

  • R141 -4 -4 Left MFC medial frontal cortex

  • R142 -4 -4 Right MFG middle frontal gyrus

  • R143 -4 -4 Left MFG middle frontal gyrus

  • R144 -4 -4 Right MOG middle occipital gyrus

  • R145 -4 -4 Left MOG middle occipital gyrus

  • R146 -4 -4 Right MOrG medial orbital gyrus

  • R147 -4 -4 Left MOrG medial orbital gyrus

  • R148 -4 -4 Right MPoG postcentral gyrus medial segment

  • R149 -4 -4 Left MPoG postcentral gyrus medial segment

  • R150 -4 -4 Right MPrG precentral gyrus medial segment

  • R151 -4 -4 Left MPrG precentral gyrus medial segment

  • R152 -4 -4 Right MSFG superior frontal gyrus medial segment

  • R153 -4 -4 Left MSFG superior frontal gyrus medial segment

  • R154 -4 -4 Right MTG middle temporal gyrus

  • R155 -4 -4 Left MTG middle temporal gyrus

  • R156 -4 -4 Right OCP occipital pole

  • R157 -4 -4 Left OCP occipital pole

  • R160 -4 -4 Right OFuG occipital fusiform gyrus

  • R161 -4 -4 Left OFuG occipital fusiform gyrus

  • R162 -4 -4 Right OpIFG opercular part of the inferior frontal gyrus

  • R163 -4 -4 Left OpIFG opercular part of the inferior frontal gyrus

  • R164 -4 -4 Right OrIFG orbital part of the inferior frontal gyrus

  • R165 -4 -4 Left OrIFG orbital part of the inferior frontal gyrus

  • R166 -4 -4 Right PCgG posterior cingulate gyrus

  • R167 -4 -4 Left PCgG posterior cingulate gyrus

  • R168 -4 -4 Right PCu precuneus

  • R169 -4 -4 Left PCu precuneus

  • R170 -4 -4 Right PHG parahippocampal gyrus

  • R171 -4 -4 Left PHG parahippocampal gyrus

  • R172 -4 -4 Right PIns posterior insula

  • R173 -4 -4 Left PIns posterior insula

  • R174 -4 -4 Right PO parietal operculum

  • R175 -4 -4 Left PO parietal operculum

  • R176 -4 -4 Right PoG postcentral gyrus

  • R177 -4 -4 Left PoG postcentral gyrus

  • R178 -4 -4 Right POrG posterior orbital gyrus

  • R179 -4 -4 Left POrG posterior orbital gyrus

  • R180 -4 -4 Right PP planum polare

  • R181 -4 -4 Left PP planum polare

  • R182 -4 -4 Right PrG precentral gyrus

  • R183 -4 -4 Left PrG precentral gyrus

  • R184 -4 -4 Right PT planum temporale

  • R185 -4 -4 Left PT planum temporale

  • R186 -4 -4 Right SCA subcallosal area

  • R187 -4 -4 Left SCA subcallosal area

  • R190 -4 -4 Right SFG superior frontal gyrus

  • R191 -4 -4 Left SFG superior frontal gyrus

  • R192 -4 -4 Right SMC supplementary motor cortex

  • R193 -4 -4 Left SMC supplementary motor cortex

  • R194 -4 -4 Right SMG supramarginal gyrus

  • R195 -4 -4 Left SMG supramarginal gyrus

  • R196 -4 -4 Right SOG superior occipital gyrus

  • R197 -4 -4 Left SOG superior occipital gyrus

  • R198 -4 -4 Right SPL superior parietal lobule

  • R199 -4 -4 Left SPL superior parietal lobule

  • R200 -4 -4 Right STG superior temporal gyrus

  • R201 -4 -4 Left STG superior temporal gyrus

  • R202 -4 -4 Right TMP temporal pole

  • R203 -4 -4 Left TMP temporal pole

  • R204 -4 -4 Right TrIFG triangular part of the inferior frontal gyrus

  • R205 -4 -4 Left TrIFG triangular part of the inferior frontal gyrus

  • R206 -4 -4 Right TTG transverse temporal gyrus

  • R207 -4 -4 Left TTG transverse temporal gyrus

Examples