admcbapp.RdAD Metabolomics Consortium Bile Acids - Post-processed
data(admcbapp)
A data frame with 1671 rows and 58 variables
A dataset with variables as follows:
ORIGPROT -4 -4 Original study protocol
RID -4 -4 Participant roster ID
VISCODE -4 -4 Visit code
PLATFORM_ID -4 -4 BILEACID: Biocrates Bile Acid Kit
SAMPLE_ID -4 -4 -4
PLATE_ID -4 -4 Plate bar code number from which the sample was injected
SAMPLE_BAR_CODE -4 -4 -4
SPECIES -4 -4 Species of sample
MATERIAL -4 -4 For this study the samples are serum
WELL_POSITION -4 -4 Well number in the 96-well plate from which the sample was injected
SAMPLE_VOLUME -4 -4 The volume of sample injected in microliters
SUBJECT_FLAG -4 -4 A flag shows whether a sample were excluded during preprocessing steps; 0: sample were not excluded. 1: sample were excluded
CA -4 -4 Cholic acid [M]
CDCA -4 -4 Chenodeoxycholic acid [M]
DCA -4 -4 Deoxycholic acid [M]
GCA -4 -4 Glycocholic acid [M]
GCDCA -4 -4 Glycochenodeoxycholic acid [M]
GDCA -4 -4 Glycodeoxycholic acid [M]
GLCA -4 -4 Glycolithocholic acid [M]
GUDCA -4 -4 Glycoursodeoxycholic acid [M]
TCA -4 -4 Taurocholic acid [M]
TCDCA -4 -4 Taurochenodeoxycholic acid [M]
TDCA -4 -4 Taurodeoxycholic acid [M]
TLCA -4 -4 Taurolithocholic acid [M]
TMCA_A_B -4 -4 -4
TUDCA -4 -4 Tauroursodeoxycholic acid [M]
UDCA -4 -4 Ursodeoxycholic acid [M]
CA.CDCA -4 -4 CA:CDCA ratio
DCA.CA -4 -4 DCA:CA ratio [unitless]
GLCA.CDCA -4 -4 GLCA:CDCA ratio [unitless]
GDCA.CA -4 -4 GDCA:CA ratio [unitless]
GDCA.DCA -4 -4 GDCA:DCA ratio [unitless]
TDCA.CA -4 -4 TDCA:CA ratio [unitless]
TLCA.CDCA -4 -4 TLCA:CDCA ratio [unitless]
TDCA.DCA -4 -4 TDCA:DCA ratio [unitless]
CA_LOGTRANSFORMFLAG -4 -4 Flag showing whether Cholic acid levels were log2 transformed
CDCA_LOGTRANSFORMFLAG -4 -4 Flag showing whether Chenodeoxycholic acid levels were log2 transformed
DCA_LOGTRANSFORMFLAG -4 -4 Flag showing whether Deoxycholic acid levels were log2 transformed
GCA_LOGTRANSFORMFLAG -4 -4 Flag showing whether Glycocholic acid levels were log2 transformed
GCDCA_LOGTRANSFORMFLAG -4 -4 Flag showing whether Glycochenodeoxycholic acid levels were log2 transformed
GDCA_LOGTRANSFORMFLAG -4 -4 Flag showing whether Glycodeoxycholic acid levels were log2 transformed
GLCA_LOGTRANSFORMFLAG -4 -4 Flag showing whether Glycolithocholic acid levels were log2 transformed
GUDCA_LOGTRANSFORMFLAG -4 -4 Flag showing whether Glycoursodeoxycholic acid levels were log2 transformed
TCA_LOGTRANSFORMFLAG -4 -4 Flag showing whether Taurocholic acid levels were log2 transformed
TCDCA_LOGTRANSFORMFLAG -4 -4 Flag showing whether Taurochenodeoxycholic acid levels were log2 transformed
TDCA_LOGTRANSFORMFLAG -4 -4 Flag showing whether Taurodeoxycholic acid levels were log2 transformed
TLCA_LOGTRANSFORMFLAG -4 -4 Flag showing whether Taurolithocholic acid levels were log2 transformed
TMCA_A_B_LOGTRANSFORMFLAG -4 -4 -4
TUDCA_LOGTRANSFORMFLAG -4 -4 Flag showing whether Tauroursodeoxycholic acid levels were log2 transformed
UDCA_LOGTRANSFORMFLAG -4 -4 Flag showing whether Ursodeoxycholic acid levels were log2 transformed
CA.CDCA_LOGTRANSFORMFLAG -4 -4 Flag showing whether CA:CDCA ratio values were log2 transformed
DCA.CA_LOGTRANSFORMFLAG -4 -4 Flag showing whether DCA:CA ratio values were log2 transformed
GLCA.CDCA_LOGTRANSFORMFLAG -4 -4 Flag showing whether GLCA:CDCA ratio values were log2 transformed
GDCA.CA_LOGTRANSFORMFLAG -4 -4 Flag showing whether GDCA:CA ratio values were log2 transformed
GDCA.DCA_LOGTRANSFORMFLAG -4 -4 Flag showing whether GDCA:DCA ratio values were log2 transformed
TDCA.CA_LOGTRANSFORMFLAG -4 -4 Flag showing whether TDCA:CA ratio values were log2 transformed
TLCA.CDCA_LOGTRANSFORMFLAG -4 -4 Flag showing whether TLCA:CDCA ratio values were log2 transformed
TDCA.DCA_LOGTRANSFORMFLAG -4 -4 Flag showing whether TDCA:DCA ratio values were log2 transformed
if (FALSE) { describe(admcbapp) }